SNPs | Chromosome | Functional Consequence | Major/minor alleles | Genotyping assays or primers |
---|---|---|---|---|
EBI3 | 19:4229916 | Intron variant | G > C | GAATTTGAGTCACACTCATTCCTTT[C/G] |
rs428253 | GTTTCTTTTTGGTTTTGTTTTTTGA | |||
EBI3 | 19:4236999 | Missense variant, coding sequence variant | G > A | TGTGCGGCCCCGAGCCAGGTACTAC[A/G] |
rs4740 | TCCAAGTGGCGGCTCAGGACCTCAC | |||
IL-12A rs2243115 | 3:159988493 | Upstream transcript variant, intron variant | T > G | Forward: 5′-AGAAAAGACCTGTGAACAAAACGACT-3′ |
Reverse: 5′-AGATGGCTCACTAGATGCCAGG-3′ | ||||
IL-12A rs568408 | 3:159995680 | 3 prime UTR variant, intron variant | G > A | Forward: 5′-GAAGGATGGGACYATTACATCCATAT-3′ |
Reverse: 5′-CAGGATGGATATTTTCCCTTCT-3′ |