Skip to main content

Table 7 TGF-β1 regulated gene expression of ALK1 response genes in HMEC-1 cells. HMEC-1 cells (human microvascular endothelial cell line) were incubated with the indicated amounts of TGF-β1. Gene expression after 24 hours was assesed by qRT-PCR. Gene expression profile of non-TGF-β1 treated cells served as reference. qRT-PCR based relative gene expression was calculated using the comparative ΔΔCT method. RQ represents the relative expression level (fold change) compared to the reference sample. RQMax/Min are the relative maximum/minimum expression levels of the mean expression level RQ. The right column shows in comparison the average RQ level of three independent experiments with HMEC-1 cells infected with AdALK1QD (see Table 4). Genes with RQ values in bold are considered to be up-regulated and RQ values in italic are considered to be down-regulated.

From: ALK1 signalling analysis identifies angiogenesis related genes and reveals disparity between TGF-β and constitutively active receptor induced gene expression

 

HMEC-1

 

0.5 ng TGF-β1/ml

4 ng TGF-β1/ml

AdALK1QD

Gene [GenBank number]

24 hours RQ (RQMax/Min)

24 hours RQ (RQMax/Min)

RQ

GADD153 [S40706]

0.64 (1.55/0.27)

0.56 (0.74/0.43)

4.55

IL-8 [M28130]

0.17 (0.32/0.09)

0.14 (0.16/0.13)

1056.07

SMAD6 [U59914]

0.74 (0.83/0.66)

0.78 (0.87/0.69)

14.56

COL5A1 [D90279]

1.75 (2.00/1.53)

2.65 (3.51/2.01)

2.28

HEF1 [L43821]

3.26 (3.50/3.05)

3.37 (3.99/2.85)

3.93

TLR4 [U93091]

0.80 (1.05/0.61)

0.96 (1.07/0.87)

3.98

ET-1 [J05008]

3.27 (3.47/3.09)

3.06 (3.52/2.66)

3.87

CARP [X83703]

0.89 (1.21/0.65)

1.32 (2.41/0.72)

4.29

HPTPη [D37781]

0.94 (1.12/0.79)

1.14 (1.62/0.80)

2.08

ID1 [S78825]

0.72 (0.79/0.65)

0.91 (1.07/0.78)

6.56

BMP6 [M60315]

2.44 (2.72/2.19)

2.60 (2.82/2.39)

4.26

ALK5 [L11695]

1.07 (1.16/0.98)

1.43 (1.64/1.25)

1.36

TβRII [M85079]

0.97 (1.10/0.85)

0.99 (1.04/0.94)

1.26

Endoglin [J05481]

1.04 (1.22/0.88)

1.22 (1.29/1.16)

2.36

c-myc [V00568]

1.32 (1.71/1.02)

1.47 (1.88/1.16)

1.45

ALK1 [L17075] ABI assay

1.01 (1.23/0.83)

1.23 (1.45/1.04)

1.40

ALK1 [L17075] own assay

1.26

1.01

5079.92*

  1. *, ectopic expression