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Table 1 Sequence of the rat Abcg5 and rat Abcg8 intron-exon boundaries

From: The rat STSL locus: characterization, chromosomal assignment, and genetic variations in sitosterolemic hypertensive rats

Exon

Exon size (bp)

Sequence of exon-intron boundaries

Intron

Intron size (bp)

  

Abcg5

  

1

145

TCAGCGTCAGgtaaggggacccca...gatttcctttaaagCAACCGTGTC

1

612

2

121

GGTAGCTCAGgtaagcgcctcgag...ttgtcgcccctgagGCTCAGGGAA

2

5000

3

136

CCTCCTGCAGgtgggcgtgtccct...cccctttcctgcagAGCGATGTCT

3

86

4

98

CGACAAGAAGgtacttttagttaa...tgtgtctcttacagGTAGAGGCAG

4

2320

5

132

CAGGACCCCAgtaagtgggacaca...ttctttgctggcagAGGTCATGAT

5

1317

6

139

GCTCTTCCACgtaagggaacaccc...tgtggtccaatcagCACTTCGACA

6

901

7

130

GATTTCTACAgtaagtgcattttt...ggggaaacttttagTGGACTTGAC

7

699

8

213

TTCTCCTGAGgtaagagccttgga...catttggttttcagGAGAGTAACG

8

104

9

205

GTGAACCTCTgtaagtgcctgtgt...gccttccatgccagTTCCCATGCT

9

836

10

138

TGTGTTACTGgtaaggtggtgtcc...tcgtgtttttctagGACTCTGGGC

10

2810

11

185

GATTTATCAGgtaagaagaaatga...ttctctttcttaagAAACATAGAA

11

4500

12

112

TTCACTTGTGgtaagtatcctatt...cttctccttggcagGTGGCTCCAA

12

1705

13

193

   
  

Abcg8

  

1

62

GGATGCTTCAgt gagtgacctagt...ctgtctcccagc agAGCCTCCAGG

1

3190

2

101

CACCTACCAGgtaggggcacatgc...acaatctgctctagGGTGGCACAT

2

623

2b

66

ATCTGAATCTgtgagttcccggtt...acctctccccacagGTGGACATGG

2b

1114

3

156

GGGAGCGCAGgtaccacagagacc...ttctgggtttgcagGCTGCGGGAG

3

3000

4

240

AGACAAACGGgtaaccagtgggct...cagcctgccctcagGTGGAAGACG

4

442

5

130

TGGAACCCAGgtgaggcctgggaa...gcgataccccccagGAATCCTCAT

5

86

6

269

GACTTCTACGgtgagtgagtaaag...tcttctgcttgcagTGGACTTGAC

6

2200

7

162

ATGCAGTCAGgtactgagagaagc...actgttcccaacagCCAGACCCTC

7

81

8

79

CCCTGATCCGgtaaatcaacctct...ttcctttctttcagTCGTCAGATT

8

1234

9

202

GTCTCCAAATgtgagtgtcacccg...tcccccatctccagCACTCGGAGC

9

165

10

73

CTTTGCCAAGgtcagggccaggag...gctgtgctttgcagGTCCTCGGTG

10

552

11

267

CTGTGGATAGgtgaggcctgcccc...cttgctgtcttcagTACCTGCATG

11

1205

12

127

CGGAGACGCGgtacgtagcgaggg...gtctgtgtccgcagATGGTCACTG

12

87

13

134

   
  1. Exon sequences are shown in uppercase letter; intron sequences are in lowercase. The underlined sequence at the donor and acceptor sites of Abcg8 intron 1 are identical to mouse.