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Table 2 Pathogenic mutations in the KCNQ1, KCNE1, KCNH2, KCNE2, SCN5A and RYR2 -genes among Swedish index cases referred for genetic testing with respect to LQTS

From: Founder mutations characterise the mutation panorama in 200 Swedish index cases referred for Long QT syndrome genetic testing

Gene

Exon

Nucleotide change

Amino acid change

Mutation type

Region

No. of probands

Reference

KCNQ1

1

c.217C>A

p.P73T

Missense

N-term

1b

Kapplinger et al. 2009

1

c.332A>G

p.Y111C

Missense

N-term

20b

Splawski et al. 2000

 

3

c.506C>G

p.T169R

Missense

S2

1c

This studya

 

3

c.509A>G

p.E170G

Missense

S2-S3

1

This studya

 

3

c.572_576del

p.R192Cfs91*

Frame shift

S2-S3

3

Tyson et al. 1997

 

4

c.643G>A

p.V215M

Missense

S3

1

Napolitano et al. 2005

 

4

c.674C>T

p.S225L

Missense

S4

2

Priori et al 1999

 

5

c.727C>T

p.R243C

Missense

S4-S5

2

Franqueza et al.1999

 

5

c.734G>T

p.G245V

Missense

S4-S5

1

This studya

 

7

c.935C>T

p.T312I

Missense

Pore

1

Wang et al. 1996

 

7

c.944A>G

p.Y315C

Missense

Pore

1

Splawski et al. 1998

 

7

c.973G>T

p.G325W

Missense

S6

1

This studya

 

7

c.973G>A

p.G325R

Missense

S6

2

Tanaka et al. 1997

 

7

c.1023_1024delinsTT

p.L342F

Missense

S6

1

Donger et al. 1997

 

7

c.1031C>A

p.A344E

Missense

S6

1

Tester et al. 2005

 

8

c.1033-1G>C

splice

Splice site

S6

1

This studya

 

8

c.1046C>G

p.S349W

Missense

C-term

1

Splawski et al. 2000

 

8

c.1066_1071del

p.Q356_Q357del

Deletion

C-term

1

Liang et al. 2003

 

10

c.1265delA

p.K422Sfs*10

Frame shift

C-term

1

Kapplinger et al. 2009

 

12

c.1552C>T

p.R518*

Nonsense

C-term

6

Wei et al. 2000

 

12

c.1588C>T

p.Q530*

Nonsense

C-term

3

Tranebjærg et al. 1999

 

13

c.1615C>T

p.R539W

Missense

C-term

1

Chouabe et al.1997

 

13

c.1664G>A

p.R555H

Missense

C-term

1

Lupoglazoff et al. 2004

 

14

c.1697C>T

p.S566F

Missense

C-term

1

Splawski et al. 2000

 

15

c.1766G>A

p.G589D

Missense

SAR

1

Piippo et al. 2001

 

15

c.1772G>A

p.R591H

Missense

SAR

1

Neyroud et al. 1999

 

15

c.1780C>T

p.R594*

Nonsense

SAR

1

This studya

 

15

c.1781G>A

p.R594Q

Missense

SAR

1

Splawski et al. 2000

 

16

c.1801C>T

p.Q601*

Nonsense

SAR

1

This studya

 

16

c.1893dup

p.R632Qfs*20

Frame shift

C-term

1b

Neyroud et al. 1999

KCNH2

2

exon 2 duplication

 

Duplication

N-term

1

This studya

 

2

c.128A>G

p.Y43C

Missense

PAS

1

Napolitano et al. 2005

 

2

c.157G>A

p.G53S

Missense

PAS

1

Nagaoka et al. 2008

 

2

c.182A>G

p.Q61R

Missense

PAS

1c

This studya

 

2

c.235_242del

p.A79Dfs*63

Frame shift

N-term

1

This studya

 

2

c.244_252dup

p.I82_Q84dup

Insertion

PAC

1

Larsen et al. 2001

 

2

c.284A>G

p.E95G

Missense

PAC

1c

This studya

 

3

c.453delC

p.T152Pfs*14

Frame shift

N-term

2

Swan et al. 1999

 

4

c.526C>T

p.R176W

Missense

N-term

1

Swan et al. 1999

 

4

c.853_859dup

p.D287Gfs*47

Frame shift

N-term

1

This studya

 

5

c.982C>T

p.R328C

Missense

N-term

1

Tester et al. 2005

 

5

c.1094A>G

p.E365G

Missense

N-term

1

This studya

 

7

c.1655T>C

p.L552S

Missense

S5

2

Swan et al. 1999

 

7

c.1688G>A

p.W563*

Nonsense

S5

1

Berge et al. 2005

 

7

c.1706A>G

p.Y569C

Missense

S5

1

This studya

7

c. 1750G>A

p.G584S

Missense

S5

1

Swan et al. 1999

 

9

c.2254C>T

p.R752W

Missense

cNBD

1

Splawski et al. 2000

 

9

c.2312A>G

p.H771R

Missense

cNBD

1

This studya

 

10

c.2453C>T

p.S818L

Missense

cNBD

1

Berthet et al. 1999

 

9-10

exon 9-10 deletion

 

Deletion

cNBD/C-term

1

This studya

 

12

c.2959_2960del

p.L987Vfs*131

Frame shift

C-term

2

Splawski et al. 2000

 

13

c.3107dupG

p.D1037Rfs*82

Frame shift

C-term

1

Berthet et al. 1999

SCN5A

2

c.86C>T

p.A29V

Missense

N-term

1b

This studya

7

c.715A>G

p.I239V

Missense

DI-S4/S5

1

Fodstad et al. 2004

 

10

c.1231G>A

p.V411M

Missense

DI-S6

4bc

Tester et al. 2005

 

22

c.3893C>T

p.P1298L

Missense

DIII-S4

1

This studya

 

23

c.4000A>G

p.I1334V

Missense

DIII-S4/S5

1

Kapplinger et al. 2009

 

26

c.4519_4527del

p.Q1507_P1509del

Deletion

DIII-DIV

4

Keller et al. 2003

 

28

c.4877G>C

p.R1626P

Missense

DIV-S4

1

Napolitano et al. 2005

 

28

c.5350G>A

p.E1784K

Missense

C-term

1

Wei et al. 1999

KCNE1

4

c.95G>A

p.R32H

Missense

Extracellular

1b

Splawski et al. 2000

KCNE2

2

c.170T>C

p.I57T

Missense

Transmembrane

1

Abbott et al. 1999

RYR2

44

c.6737C>T

p.S2246L

Missense

Cytoplasmatic loop

2c

Priori et al. 2001

 

101

c.14553C>A

p.F4851L

Missense

TM domain

1

Hayashi et al. 2009

  1. a Denotes a novel variant, unique to this cohort. b Compound heterozygous or homozygous mutations c de novo mutation.